Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDIDKQLQEQVNNLDRTEKSAAELERKIQEHKEEFMKKEKKQTTGRDKYRAYKKEQNSF
2WUJ Chain:A ((25-52))
---VNEFLAQVRKDYEIVLRKKTELEAKVNE-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2268 for 104 contacts (21.8/contact) +
2D Compatibility (PS) -3119 + (NN) -1979 + (LL) 2136
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -2594.0 ( -24.94 by residue)
QMean score : 0.769
(partial model without unconserved sides chains):
PDB file :
Tito_2WUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WUJ-query.scw
PDB file :
Tito_Scwrl_2WUJ.pdb
: