Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPIICALDTQDLNEAISLANTLRDKVGMIKLGLEFFAAHGPSGVREVAKCNVPTFLDLKLHDIPNTVAKTVEAIKVLNIEILTLHISGGTKMLEEALSIVKD------TKTKLIGVTVLTSMSNEDL-SELGIAREVKSQVILFAKLAKKVGLHGIVCSALEAQEVYQECGKDFKIITSGIRVGF-GHDDQKRTATPKEAINSGADYIVIGRPITKSNSPANSAELILKSLS
1DBT Chain:A ((6-226))
--PII-ALDFASAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWE
General information:
TITO was launched using:
RESULT:
Template:
1DBT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132421 for 1753 contacts (-75.5/contact) +
2D Compatibility (PS) -23258 + (NN) -9624 + (LL) 184
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -186019.0 ( -106.11 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1DBT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DBT-query.scw
PDB file :
Tito_Scwrl_1DBT.pdb
: