Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKFAILFSILLAIVAYHLNNEVAFEVARLFSGIFISLLKLISLPLVFLSIVSTISGLKDSIEIKTLVKKTLFYTLLTTIIAAFVALSFYLLIDPVRKNFISNTIESASNSNYNYFSYLKL-LIPSNFMQVFLKNNTIGSILIAFLMGRAIISLPKGKQDILHQVFSALFDT-------LLKIAQWLLKFIPLAVWSFITCFLHELKGGSEFYSLLWYFACIMSANSVQAFLILPLLMWCKGISPIQTLRGVMPALTLAFFSKSSSATLPTTIDCVQNKLKVPKKLSSFILPICTTINMNACATFILITVMFVAEMNGCTFSLSEIFIWIFLATGAAIGNAGVPMGCYFMATSYLVSMNVPL--------YIMGLILPIYTIIDMFETAINVWSDVCVTQIINKEYKGEI |
| 4OYF Chain:A ((21-414)) | -----ILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLKMLVMPIVFASLVVGAASISPARLGRVGVKIVVYY-LLTSAFAVTLGIIMARLFNPGAGIHLAVGGQ---------LVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMAE-QGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMR-VAKEMGISEGIYSFTLPLGATINMDGTALYQGVCTFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLAMVLHSVGLPLTDPNVAAAYAM--ILGIDAILDMGRTMVNVTGDLTGTAIVAKTE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OYF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -417025 for 3206 contacts (-130.1/contact) +
2D Compatibility (PS) -38326 + (NN) -16765 + (LL) 972
1D Compatibility (HY) -29200 + (ID) 5050
Total energy: -505394.0 ( -157.64 by residue)
QMean score : 0.391
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