Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MINKRLLLLILYFTITGCNIDCVEPGLQSRNTSVNVDVPVHKADEGTEIHWVDSGQVISKGEEIKFTLDGSINFCPLKEDKNPRKVLVPAVFCADGSIPSYSDELINNSGLNEQEVCKNVGFGNSQSYSKRRYVDTGIKVNFGDRLRFRLVPREITIDHGNPGGKGISFDDNCYRTEKGDDKATIKDMLNGGTFYCENNGKRIAEKFPQLSKENMERREVLVGNGYTPYDNKVHFNRGYIQDESPWMHGSLLDLRRTKIGLNELCDGKDCDFNKIQKQSSTKIELDQLCKRGKCDSDEIKKYSSYELNCYYQNVCYTERGIWNYSSHENKERNCVSSIRYNKYDKGNKCDMYSYLEEIQKRLKSTEQNKQDTEQVNKNNKDSGDEDDEEDKDISRAEALVAKISDPGGASIPGSERYDMKDTAKGTQCLPKRKGAHENLVCSELNDNFRHFSLRLNHDYAIDMEGVKPNSSVMLAIADYGHYYYNRGGYHVEVTRSCEYINGQKLYMYLGDEPPKDLRGIGTSDFQIVGVRKGKDEYIILDVISGEHFRDGESKKIYFGIDVRSAEKDDITDKNGRYYENNKYIVTLFIKRKINDFISSNINKIFNFIKKEVIGDSVKVSYEGYTKSLLQGVRALLTLYVIFTVVGYMLGTIQLSKFDFIIRMMKIAFIAFALSDRSWELFGMTLSKLFMDGSTYLVD---SFSGYIGEGSERFAFLDLTAGVLFTGETWLKFLSLMLAGPFGFVTFLIILHASFTFLQCIISATFKYVISTILVAFLLSLTPLFIIFILFQQTKSLFDNWIKTLAHVVVQPVVLFSSLSILNQLMYSALYNLTNFSACYQCLISVNFLSYDLCIMKSILPLGYNPGTSVDVALNTGERTGGHFAALPIDLIQAFIYLIIAGTMEVFVGASEAVAQAIFGAGYGIINGVSNVASSASQSILSTVGLDRDTQGNIKRIRGAIHKDPAEIKAQLPTPKESQAEKLSDVSNKEKPDDGKDAKKKQKQTEEQLKAPSKKKRSNQEDSGEATSTSSDDHQSKEDEKKN |
4JO0 Chain:A ((269-296)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTFLVDPVLSYSGYPGGAENRFTFADLPERIDHLLITHNHQDHMLFETLLRIRHRVGRVLVPKSTNASLVDPGLGGILRRLGFTDVVEVDDLETLSCGSAEVVALPFLGEHGDLRIRSKTGWLIRFGERSVLFAADSTNISPTMYTKVAEVIGPVDTVFIGMESIGAAASWIYGPLYGEPLDRRTDQSRRLNGSNFPQAREIVDALEPDEVYVYAMGLEPWMGVVMAVDYDESHPAIVDSDLLVRHVQDKGGTAERLHLRRTLRL-------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 236 for 77 contacts (3.1/contact) +
2D Compatibility (PS) -2779 + (NN) -207 + (LL) 45344
1D Compatibility (HY) -2400 + (ID) 750
Total energy: 39444.0 ( 512.26 by residue)
QMean score : -0.079
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