Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEID--VDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
4F3R Chain:A ((5-156))
----KPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACAPT----------LKLEERVNLIADVLTDERVEVLPLTGLLVDFAKTHQANFILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPAREGYSYVSGTMVREIVTLGGDVSPFVPPLVARHL---------
General information:
TITO was launched using:
RESULT:
Template:
4F3R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94949 for 1100 contacts (-86.3/contact) +
2D Compatibility (PS) -15231 + (NN) -4077 + (LL) 1280
1D Compatibility (HY) -18800 + (ID) 3750
Total energy: -135527.0 ( -123.21 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_4F3R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F3R-query.scw
PDB file :
Tito_Scwrl_4F3R.pdb
: