Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKEIKTKTKERMLKTIQSFYNDIKGIRTGRASASLLDGIVVNIYGGHQKLNQVAGVSVTDNKTLLIKVWDIGVIGEVKNAILNANLNLNPVVEGNTIRIVLPDLTQETRERLVKLLHQFAENARVAIRNIRRDIMEEIERMQENKKISEDDFHNAKKEIQNITDDNIKKIDGELSIKEKDILNY
3J0D Chain:J ((3-184))
-LKELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEILG-
General information:
TITO was launched using:
RESULT:
Template:
3J0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82740 for 1245 contacts (-66.5/contact) +
2D Compatibility (PS) -19770 + (NN) -5671 + (LL) 128
1D Compatibility (HY) -11200 + (ID) 3600
Total energy: -122853.0 ( -98.68 by residue)
QMean score : 0.681
(partial model without unconserved sides chains):
PDB file :
Tito_3J0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J0D-query.scw
PDB file :
Tito_Scwrl_3J0D.pdb
: