Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATHLSFRQGVQECIPTLLGYAGVGISFGIVASSQNFSILEIILLCLVIYAGAAQFIMCALFIAGTPISAIVLTVFIVNSRMFLLSMSLAPNFKTYGFWNRVGLGSLVTDETFGVAITPYLKGEAINDRWMHGLNITAYLFWAISCVAGALFGEYISNPQTLGLDFAITAMFIFLAIAQFESITKSRLRIYIVLIIAVIVMMLSLSMFMPSYLAILIAATISAALGVMMER
2LS4 Chain:A ((5-17))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LCIAVAAGAGTGY----


General information:
TITO was launched using:
RESULT:

Template: 2LS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2616 for 43 contacts (-60.8/contact) +
2D Compatibility (PS) -1308 + (NN) 1036 + (LL) 20100
1D Compatibility (HY) -800 + (ID) 200
Total energy: 16212.0 ( 377.02 by residue)
QMean score : -0.389

(partial model without unconserved sides chains):
PDB file : Tito_2LS4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LS4-query.scw
PDB file : Tito_Scwrl_2LS4.pdb: