Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHNIFYNRREFQMIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQLKVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSLNQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFIDPYANYSEFKDVDDLIDKVFNVEAIQYKVFGEK
3KF4 Chain:A ((23-98))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGQYGEVYEGVW-------KKYSLTVAVKTLK-----VEEF--LKEAAVMKEIKHPNLV-QLLGVCTREPPFYIITEFMTYGNLLD----------------------


General information:
TITO was launched using:
RESULT:

Template: 3KF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17721 for 396 contacts (-44.8/contact) +
2D Compatibility (PS) -7539 + (NN) -5046 + (LL) 21236
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -16270.0 ( -41.09 by residue)
QMean score : 0.252

(partial model without unconserved sides chains):
PDB file : Tito_3KF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KF4-query.scw
PDB file : Tito_Scwrl_3KF4.pdb: