Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTFKPLPIFILSVLSSLPKARLSKNKIFIVFRFSSVTDKTTQNKKDTREVSRIFYSAIAPDC
2R1F Chain:A ((136-167))
----------------------------NQLVTMASIIEKETAVASERDQVASVFINRLR---
General information:
TITO was launched using:
RESULT:
Template:
2R1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4564 for 147 contacts (-31.0/contact) +
2D Compatibility (PS) -3094 + (NN) 525 + (LL) 1908
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -8275.0 ( -56.29 by residue)
QMean score : 0.267
(partial model without unconserved sides chains):
PDB file :
Tito_2R1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R1F-query.scw
PDB file :
Tito_Scwrl_2R1F.pdb
: