Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRIHLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPNTSLKD------QWWDERDFAVIDPDNNLISFFQQIKS
1MH6 Chain:A ((204-318))
--QATPNLPSRDFDSTAAFY-ERLGFGIVFRDAGWMILQRGDLMLEFF--------AHPGLDP--------LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQEWGGTMAALVDPDGTLLRLIQ----
General information:
TITO was launched using:
RESULT:
Template:
1MH6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61492 for 712 contacts (-86.4/contact) +
2D Compatibility (PS) -11502 + (NN) -1299 + (LL) 1612
1D Compatibility (HY) -10000 + (ID) 1500
Total energy: -84181.0 ( -118.23 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1MH6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MH6-query.scw
PDB file :
Tito_Scwrl_1MH6.pdb
: