Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIANMTIMLLIGVLGGFISGLIGIGGAIIIYPAILILPPLIGIPAYSAYIASGLTSSQVFFSTLSGSLNARKQPAFSPKLVIYMGGGMLIGSMLGAILA-SLFNATFVNTVYVIIAILALILMFIKVKPTTQETKSKPLLFIIVGFGIGVISGIVGAGGAFIIIPVLLALFKLPMNTVVNNSIAIAFISSVGAFFIKLMQGYIPVESAIFLIIE |
2WOE Chain:A ((252-277)) | --------------------------------------------------------------------------------------TGALAGMLAGATYGVDDIPSGWLSKL------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8613 for 95 contacts (-90.7/contact) +
2D Compatibility (PS) -2431 + (NN) 2030 + (LL) 15776
1D Compatibility (HY) -800 + (ID) 250
Total energy: 5712.0 ( 60.13 by residue)
QMean score : -0.206
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