Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFLNTIESQFDKVAEDYDFVNELLNDYSFFVSNMSPKKGRALDIGCGSGLLVEKLASYYDEVVGIDISNQMLDLAKSKRQLTNTVYLNMNAEQLNF-NEKFDFIVSRTTFHHLDDIASVIQQMKELLNEEGRIVILDNVSEVETPPTYVYKLGAIQEFLPHCFKFGIKNAIRIYNHNTSKSWLEHLASDKYLSEQNYYDLYEKLLPGCQFHKMGWAMGVVWTK
2GS9 Chain:A ((41-144))
-----------------------------------------LEVGAGTGYWLRRLP--YPQKVGVEPSEAML--AVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVV--GVLEALSPWAALYR------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62519 for 763 contacts (-81.9/contact) +
2D Compatibility (PS) -11186 + (NN) -3386 + (LL) 7896
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -79895.0 ( -104.71 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_2GS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GS9-query.scw
PDB file :
Tito_Scwrl_2GS9.pdb
: