Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDNRSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILSVHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLITTHAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTYINRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQKQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASRFVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEKHHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQNIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA |
1ZR2 Chain:A ((3-168)) | ---LFGYARVST-SQQSLDIQVRALKDAGVKAN----RIFTDKASGSSSDRKGLDLLRMKVKEG--DVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDSYIGKMVVTILSAVAQAERQRILQRTNEGRQEAMAKG------VVFGRKRK-----IDRD------AVLNMWQQGLGASHISKTM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZR2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64152 for 1039 contacts (-61.7/contact) +
2D Compatibility (PS) -17858 + (NN) -6040 + (LL) 21036
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -77864.0 ( -74.94 by residue)
QMean score : 0.289
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