Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIVNIVIMLLIGVFGGFISGLVGVGGAIIIYPAILLLPPLFGAPAYSAYIASGLTSSQVFFSTLSGSLKARKKTEFSPQLVLYMGGGMIIGSMLGAFLANLFDATFVNTVYIIIALLALTLMFIKVKPSSEKSSFNKYLLVIIGLFIGIISGIVGAGGAFIIIPILLVLFKLPMNTVVANSIVIAFISSIGAFVIKLIQGYIPLYDALFLIIGSIIFAPIGLKLSKKVPNIIQKWIISILIVFAIVQLIL |
| 4IKY Chain:A ((331-376)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHLSPAWFQSLNPLFIIILAPVFAWMWVKLGKRQPTIPQKFALGLL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10886 for 186 contacts (-58.5/contact) +
2D Compatibility (PS) -4588 + (NN) 1563 + (LL) 17656
1D Compatibility (HY) -5600 + (ID) 800
Total energy: -2655.0 ( -14.27 by residue)
QMean score : -0.083
|
|
|