Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLSKYIEVADSEGLTITQATETHIHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMPSKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPDLLEKSVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKINNWAFNEIDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLYQSYDVYPSLDNKRVAFDLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLIGFDKVAGYRLPKSGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLLNENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK |
1QH3 Chain:A ((11-173)) | -------DNYM----YLVIDDETKEAAIVDPVQP-QKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVK-LESGLKVYG-GDDRIG-----ALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGG--SEPPAVFTGDTLFVAGCGK--------FYEGTADEMCKALLEV---LGRLPPDTRVYCGH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59245 for 1363 contacts (-43.5/contact) +
2D Compatibility (PS) -18136 + (NN) -9705 + (LL) 14692
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -84844.0 ( -62.25 by residue)
QMean score : 0.510
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