Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNREMLYLNRSDIEQAGGNHSQVYVDALTEALTAHAHNDFVQPLKPYLRQDPENGHIADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASLISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIKRVFVYDQFSEACARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI-------MDVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLVTGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQQAQQQNIGTTLNLY
1VLL Chain:A ((21-320))------------------------MNAVEEAFRLYALGKAQMPPKVYL--EFEKGDLR----AMPAHLMG---YAGLKWVNSHPGNPDK-GLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFD-IGEVKAYDVREKAAKKFVSYCEDR----GISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVE---ILKKAKIVVDDLEQA-KHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDSTGLAIQDVAVAKVVYENALSKNVGSKIKFF


General information:
TITO was launched using:
RESULT:

Template: 1VLL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162251 for 2500 contacts (-64.9/contact) +
2D Compatibility (PS) -31636 + (NN) -13017 + (LL) 3104
1D Compatibility (HY) -19200 + (ID) 5150
Total energy: -228150.0 ( -91.26 by residue)
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_1VLL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VLL-query.scw
PDB file : Tito_Scwrl_1VLL.pdb: