Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKLQLKKWKCRENDIEAVHNNKGYAYQRKLDALEEVRKGYYPIKRAIDLVLSIVLLFLTFPIMFIFAIAIVIDSPGNPIYSQVRVGKMGKLIKIYKLRSMCKNAEKNGAQWADKDDDRITNVGKFIRKTRIDELPQLINVVKGEMSFIGPRPERPEFVELFSSEVIGFEQRCLVTPGLTGLAQIQGGYDLTPQQKLKYDMKYIHKGSLMMELYISIRTLMVVITGEGSR |
3QFW Chain:A ((78-107)) | ------------------------------------------------------------------------------------------------------------------------------------AEPGQLLNMLFGNSSI---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 435 for 60 contacts (7.2/contact) +
2D Compatibility (PS) -1615 + (NN) 33 + (LL) 16120
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 13473.0 ( 224.55 by residue)
QMean score : 0.061
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