Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESTLELTKIKEVLQKNLKILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVKSPRILDEVSKDLNDKYSPSKLSSMLTITNQENTQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKIMSVDNVSILSKADGTAVKVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
| 1KFA Chain:L ((170-217)) | --------------------------------------------------------------------------------------------DQDSKDSTYSMSSTLTLTKDEYERHASYTCEAAHKTSTSPIAKSFNRA---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8578 for 182 contacts (47.1/contact) +
2D Compatibility (PS) -4867 + (NN) 136 + (LL) 15348
1D Compatibility (HY) -400 + (ID) 750
Total energy: 18045.0 ( 99.15 by residue)
QMean score : 0.229
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