Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH |
3QFW Chain:A ((78-107)) | ----------------------------------------------------------------------------------------AEPGQLLNMLFGNSSI--------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 859 for 60 contacts (14.3/contact) +
2D Compatibility (PS) -1630 + (NN) -926 + (LL) 12472
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 9125.0 ( 152.08 by residue)
QMean score : 0.231
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