Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEVYEEVLSSGKLKVSTTPEAS----DVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-CLVHCPERVLPGKILEELVHNNRIIGGV-----TKACIEAGKYVYRTFVQG--EMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIH--QPGPGVGGHCLAVDPYFIIAKDPENAKLIQTGREINNSMPAYVVDTTKQIIKA----------LSGNKVTVFGLTYKGDVDDIRESPAFD-IYELLNQEPDIEVCAYDPHVE--------LDFVEH-----------DMSHAVKDASLVLILSDHSEFKNLSDSHFDKM-KHKVIFDTKNVVKSSFEDVSYYNYGNIFNFIDK |
| 2Y0C Chain:A ((9-441)) | MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDG--SADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSS------VNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSR--GARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193837 for 3185 contacts (-60.9/contact) +
2D Compatibility (PS) -41475 + (NN) -7107 + (LL) 1672
1D Compatibility (HY) -19200 + (ID) 6200
Total energy: -266147.0 ( -83.56 by residue)
QMean score : 0.518
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