Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKRQMGIFIYAGIIGGLLSGIVKLGWEVMFPPRTPERNATNPPQELLQQLGFSSEFTHQTYTFSNMELPWVSFIVHFSFSIVIAIIYCILVKKYAYLAIGQGAVFGIAIWVLFHLIIMPIMHTVPAVWDQPYQEHLSEFFGHIVWMMTIELVRQHFVYRYKLN |
| 1V54 Chain:I ((16-35)) | --ARRLRFHIVGAFMVSLGFATFY-------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6812 for 71 contacts (-95.9/contact) +
2D Compatibility (PS) -2044 + (NN) 636 + (LL) 13184
1D Compatibility (HY) -800 + (ID) 100
Total energy: 4064.0 ( 57.24 by residue)
QMean score : -0.159
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