Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFIVIKIGGSTLSDMHPSIINNIKHLRSNNIYPIIVHGGGPFINEALSNQQIEPHFVNGLRVTDKATMTITKHTLIADVNTALVAQFNQHQCSAIGLCGLDAQLFEITSFDQQ-YGYVGVPTALNKDAL-QYLCTKFVPIINSIGFNNHDGEFYNINAD-TLAYFIASSLKAPIYVLSNIAGVLINDVVIPQLPLVDIHQYIEHGDIYGGMIPKVLDAKNAIENGCPKVIIASGNKPNIIESIYNNDFVGTTILNS
3L86 Chain:A ((38-267))
--IIVIKIGGVASQQLSGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQVPVKKINGLRVTSKDDMVLVSHALLDLVGKNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINKRVIEEFLENRQIPILASLGYSK-EGDMLNINADYLATAVAVALAADKLILMTNVKGVLENGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIG------------------------
General information:
TITO was launched using:
RESULT:
Template:
3L86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183893 for 1836 contacts (-100.2/contact) +
2D Compatibility (PS) -24414 + (NN) -6527 + (LL) 952
1D Compatibility (HY) -17600 + (ID) 3500
Total energy: -234982.0 ( -127.99 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3L86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L86-query.scw
PDB file :
Tito_Scwrl_3L86.pdb
: