Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSKLPLFNHFANIRIQPKLIIKLFLTLIIIVTYTFVSGLSVDYKKLLSEAGLSETSLAQIKIFSQISIFFSRVFSVLFTFLIILVISRIMRSDANTKSIFSATLSYILFTNAISLIILTIQISAGLSLIDYSITSLNIFAKGNRILGTFDLQFFVQAYILTVMLIGTSKLSIRASTIWGIIYLILIITFSLISISIQ |
| 2K6O Chain:A ((3-12)) | --------GDFFRKSKEK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259 for 32 contacts (-8.1/contact) +
2D Compatibility (PS) -919 + (NN) 71 + (LL) 18688
1D Compatibility (HY) 800 + (ID) 50
Total energy: 18331.0 ( 572.84 by residue)
QMean score : -0.104
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