Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKRKWLIVICVLLVLITISQILKHFNYGTESKEAYNTYTVEKERQLDLQGKAYPREVKTYYKNNQVGTYLGVQVADGQTVKKGDMLINYKINSNKRQ--QLVDKINDTQHIITEVYLNITKGLNNREIQKKLIEYKQTLYEAQQQLYQYDSQ-NRDSMYASFDGKIMIKNIDN---DSDNQP--ILYLISK-ESHIKTSVTEFDLNKVKK----GD---------KVNLSITST-GKTGAGIIKQISELPISYEENLSLHENDALHLPESNNDGELANSKSISASPIFKSNNNSELSKYGVIID--DLSLPIRAGYSLEIKVPLNAIKIPKSVLTKGNNVFIVNKNSIVEKRNIRIKRINGDIIVEKGLKPGDKLIKQPKSTMNDGDKVEISS |
| 1VF7 Chain:A ((26-262)) | --------------------------------------------TLNTELPGRTNAFRIAEVR-PQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVA---DQAVSKQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEG------------------------------------------TGSVTIRAVFPNPNNELLPGMFVHAQLQEG-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16498 for 1383 contacts (-11.9/contact) +
2D Compatibility (PS) -22632 + (NN) -2761 + (LL) 9640
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -34201.0 ( -24.73 by residue)
QMean score : 0.329
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