Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGCLVYYLLNIDLGKMIVAQDLNLQEIFFHNLIYFFSAIFGFLTLGLLNIGMLLINSGMLGFFIAHGIYSNQLKSILLVLAPHAIFEILALLIASTFSLGFLSYLYQRMVKKNKIKNKMFHNFVTTIITVIVLTIIASLLEVYVTIN
1YOZ Chain:A ((11-24))
MLYINSFLDRM----------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1YOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4331 for 31 contacts (-139.7/contact) +
2D Compatibility (PS) -1171 + (NN) -326 + (LL) 13272
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 6144.0 ( 198.19 by residue)
QMean score : -0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1YOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YOZ-query.scw
PDB file :
Tito_Scwrl_1YOZ.pdb
: