Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKVLYITAHP-FNELVSNSMAAGKAFIETYQQQHPDDE-VKHIDLFETYIPVIDKDVLTGWGKMSNGETLTDDEQMKVSRLSDILEEFLSADKYVFVTPMWNLSFPPVVKAYIDAISIAGKTFKYSAEGPQGLLTD-KKVLHIQSRGGYYTEGP-AADFEMGDRYLRTIMTFLGVPSYETIIIEGHNAEPHKTEEIKATSINNAEKLATTF
3U7I Chain:A ((6-189))
--KTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINLYDDVVPMIDKTVLSAWEKQGNGQELTREEQKVTERMSEILQQFKSANTYVIVLPLHNFNIPSKLKDYMDNIMIARETFKYTETGSVGLLKDGRRMLVIQASGGIYTNDDWYTDVEYSHKYLKAMFNFLGIEDYQIVRAQG--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3U7I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103082 for 1315 contacts (-78.4/contact) +
2D Compatibility (PS) -19317 + (NN) -3955 + (LL) 2140
1D Compatibility (HY) -18000 + (ID) 3650
Total energy: -145864.0 ( -110.92 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3U7I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U7I-query.scw
PDB file :
Tito_Scwrl_3U7I.pdb
: