Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPF-PEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQK-DHKLVMLFGDNLLDFTDPKEATAES-REALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK |
| 3ET5 Chain:A ((12-255)) | -----------------------------------------QANMQLQQQAVLG------LNWMQDSGEYKALAYQAYNAAKVAFDHAKVAKG--KKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSSEKAGTIDDMKRLGFNGVEESAFYLK-KDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNANYGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3ET5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 25046 for 1836 contacts (13.6/contact) +
2D Compatibility (PS) -25793 + (NN) -14714 + (LL) 4012
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -30899.0 ( -16.83 by residue)
QMean score : 0.417
|
|
|