Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVPEEKGSITLSKEAAIIFATAKFKPFKNRIKNNPLKTNPFLKLHENKKS
3DMB Chain:A ((45-66))
-------------GGPIWFFTSKDNALIAMLGQGR---------------
General information:
TITO was launched using:
RESULT:
Template:
3DMB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1566 for 67 contacts (23.4/contact) +
2D Compatibility (PS) -2397 + (NN) -2204 + (LL) 1588
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -3247.0 ( -48.46 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_3DMB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMB-query.scw
PDB file :
Tito_Scwrl_3DMB.pdb
: