Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDANFLEHELSYIDVLLDKNADQATKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK
2GPE Chain:A ((10-42))
------------------------------------------------------------LDDATRERIKSAATRID-RTPHWLIKQAIFSYLE--------
General information:
TITO was launched using:
RESULT:
Template:
2GPE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3405 for 162 contacts (-21.0/contact) +
2D Compatibility (PS) -3667 + (NN) -617 + (LL) 5404
1D Compatibility (HY) -400 + (ID) 300
Total energy: -2985.0 ( -18.43 by residue)
QMean score : 0.712
(partial model without unconserved sides chains):
PDB file :
Tito_2GPE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GPE-query.scw
PDB file :
Tito_Scwrl_2GPE.pdb
: