Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITYDLIGNTPLVLLEHYSD-DKVKIYAKLEQWNPGGSVKDRLGKYLVEKAIQEGRVR--AGQTIVEATAGNTGIGLAIAANRHHLKCKIFAPYGFSEEKINIMIALGADVSRTSQSEGMHGAQLAARSYAEKYGAVYMNQFESEHNPDTYFHTLGPELTSALQ-QIDYFVAGIGSGGTFTGTARYLKQH--HVQCYAVEPEGS-VLNGGPAHAHDTEGIGSEKWPIFLERRLVDGIFTIKDQDAFRNVKSLAINEGLLVGSSSGAALQGALNLKAQLSEGT-IVVVFPDGSDRYMSKQIFNYEENDYE |
| 1VE1 Chain:A ((7-301)) | ------IGKTPVVRLAKVVEPDMAEVWVKLEGLNPGGSIKDRPAWYMIKDAEERGILRPGSGQVIVEPTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPERRMLAAREEALRLKEELGAFMPDQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARSNVLSGGKMGQHGFQGMGPGFIPENLDLSLLDGVIQVWEEDAFPLARRLAREEGLFLGMSSGGIVWAALQVARELGPGKRVACISPDGGWKYLSTPLY-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VE1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -107507 for 2663 contacts (-40.4/contact) +
2D Compatibility (PS) -31494 + (NN) -7371 + (LL) 916
1D Compatibility (HY) -20800 + (ID) 5800
Total energy: -172056.0 ( -64.61 by residue)
QMean score : 0.475
|
|
|