Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPITPMGGSADSYIPYPVEVEVGGATVFVMPVDAFHQF
4RWW Chain:A ((1-109))
MKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTFIIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMPVESFHHF
General information:
TITO was launched using:
RESULT:
Template:
4RWW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61951 for 691 contacts (-89.7/contact) +
2D Compatibility (PS) -12122 + (NN) -7313 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 3350
Total energy: -97536.0 ( -141.15 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_4RWW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RWW-query.scw
PDB file :
Tito_Scwrl_4RWW.pdb
: