Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAHKLYNQKKYVAARAI-SQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII
4N69 Chain:A ((95-255))
-------DLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFA-VDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124207 for 1293 contacts (-96.1/contact) +
2D Compatibility (PS) -17537 + (NN) -9245 + (LL) 3388
1D Compatibility (HY) -12000 + (ID) 3950
Total energy: -163551.0 ( -126.49 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_4N69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N69-query.scw
PDB file :
Tito_Scwrl_4N69.pdb
: