Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSASDLKAQFYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYHLEEYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYRKW----RPYLRHRDVYHYDLKSFEDFVIASP---------DDLVFD-DIAF----GSSQVIEQNKWQHFLDQDIQNYESGRDYLPEVLTSQLSVALAYGLLDIIEIFNDL-----LARYDEDEANHEAFIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAWCEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTKDLFIDWTWGEKFFRKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIKTYLPIFNQIDAKYLHDTQRNESNLFEQGIELGSHYPRQMVDHQEKRTQVLATFKALD |
1OWP Chain:A ((137-467)) | ------------------------------------------------------------------------------------------------------------------------------------QILSGSGNPYSVYGPFWKNWQAQPKPTPVATPTELVDL-SPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIA--RLQEFCDRAIADYDPQRNFPAEAGTSGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREALFTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDPKP-LRIFNPASQAKKFDATATYIKRWLPELRHVHPK---DLISGEITPIER-----RGYPAPIVNHNLRQKQ----FKAL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OWP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82684 for 2288 contacts (-36.1/contact) +
2D Compatibility (PS) -31996 + (NN) -8604 + (LL) 12416
1D Compatibility (HY) -17600 + (ID) 6350
Total energy: -134818.0 ( -58.92 by residue)
QMean score : 0.369
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