Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLNEIQILNNGYPMPSVGLGVYKISD-EDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK
3D3F Chain:A ((10-273))-------LHNGVEMPWFGLGVFKVENGNEATESVKAAIKNGYRSIDTAAIYKNEEGVGIGIKESGVAREELFITSKVWNEDQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK--YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRDYCKGQGIQLEAWSPLMQGQ-LLDNEVLTQIAEKHNKSVAQVILRWDLQHGVVTIPKSIKEHRIIENADIFDFELSQEDMDKIDALNKDERVGPNPDEL------


General information:
TITO was launched using:
RESULT:

Template: 3D3F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135872 for 2268 contacts (-59.9/contact) +
2D Compatibility (PS) -28648 + (NN) -15587 + (LL) 1028
1D Compatibility (HY) -26800 + (ID) 6850
Total energy: -212729.0 ( -93.80 by residue)
QMean score : 0.638

(partial model without unconserved sides chains):
PDB file : Tito_3D3F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D3F-query.scw
PDB file : Tito_Scwrl_3D3F.pdb: