Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIIYFSFTGNVRRFIKRTELENTLEITAENCMEPVHEPFIIVTGTIGFGEVPEPVQSFLEVNHQYIRGVAASGNRNWGLNFAKAGRTISEEYNVPLLMKFELHGKNKDVIEFKNKVGNFNENHGREKVQSY
2XOE Chain:A ((1-113))
MLVAYDSMTGNVKRFIHKLNMP-AVQIGEDLVID---EDFILITYTTGFGNVPERVLEFLERNNEKLKGVSASGNRNWGDMFGASADKISAKYEVPIVSKFELSGTNNDVEYFKERV---------------
General information:
TITO was launched using:
RESULT:
Template:
2XOE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72531 for 905 contacts (-80.1/contact) +
2D Compatibility (PS) -11950 + (NN) -896 + (LL) 356
1D Compatibility (HY) -10800 + (ID) 2700
Total energy: -98521.0 ( -108.86 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_2XOE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOE-query.scw
PDB file :
Tito_Scwrl_2XOE.pdb
: