Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVT-VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFINDLYLNLISDLANINGIDMIDIE-WQADIDIEKHQRIIKHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDT-MDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
4GUJ Chain:A ((36-251))
---------------------EALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKA---TVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSKTGVISRLAGEVFGSAATFGAVKKASAPGQISVADLRTVLTI-
General information:
TITO was launched using:
RESULT:
Template:
4GUJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121280 for 1714 contacts (-70.8/contact) +
2D Compatibility (PS) -23122 + (NN) -12001 + (LL) 2856
1D Compatibility (HY) -12000 + (ID) 3700
Total energy: -169247.0 ( -98.74 by residue)
QMean score : 0.476
(partial model without unconserved sides chains):
PDB file :
Tito_4GUJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GUJ-query.scw
PDB file :
Tito_Scwrl_4GUJ.pdb
: