Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
2K7N Chain:A ((14-159))
-----------------VYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVT------------LAP----------------TQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKI-------
General information:
TITO was launched using:
RESULT:
Template:
2K7N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77328 for 1123 contacts (-68.9/contact) +
2D Compatibility (PS) -15631 + (NN) -6922 + (LL) 2768
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -112413.0 ( -100.10 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_2K7N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K7N-query.scw
PDB file :
Tito_Scwrl_2K7N.pdb
: