Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTLFTSPSCTSCRKAKAWLQEHDIPYTERNIFSEHLTIDEIKQILKMTEDGTDEIISTRSKTYQKLNVDIDS-LPLQDLYSIIQDNPGLLRRPIILDNKRLQVGYNEDEIRRFLPRKVRTFQLQEAQRMVD
2KOK Chain:A ((7-118))
-VTIYGIKNCDTMKKARIWLEDHGIDYTFHDYKKEGLDAETLDRFLKTVP--WEQLLNRAGTTFRKLPEDVRSNVDAASARELMLAQPSMVKRPVLERDGKLMVGFKPAQYEAYF-----------------
General information:
TITO was launched using:
RESULT:
Template:
2KOK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52256 for 706 contacts (-74.0/contact) +
2D Compatibility (PS) -11861 + (NN) -3535 + (LL) 1668
1D Compatibility (HY) -9600 + (ID) 1300
Total energy: -76884.0 ( -108.90 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2KOK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KOK-query.scw
PDB file :
Tito_Scwrl_2KOK.pdb
: