Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKISKALTWFIISFIIFHLILFIMWGEHQEYWYLYTGIMLIAGISYVFYQRDIESKRLLTSIGVGIITAIILIMLQLLFSLITSNLSYSSLIKELARTGVNWKWQMLVTLLFVIPCHELYMRTVLQKELTHFSIPKWIAILITAICSSSLFIYLDNWWIVTFIFVAQVILSLSYEYTRRIATTSVAQIVAIILLLIFNA |
1N0X Chain:P ((3-12)) | --------------------------------------------------------------------------------------------------------------------------RSYMFSDLENR------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 780 for 22 contacts (35.5/contact) +
2D Compatibility (PS) -1041 + (NN) 925 + (LL) 20804
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 20168.0 ( 916.73 by residue)
QMean score : 0.100
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