Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVNSQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPD--DGSGK------SYDYMLVNPKIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLRLKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
2OS3 Chain:A ((12-194))
LITMDDIIREGNPTLRAVAKEVSLPLCDEDILLGEKMMQFLKHSQDPVMAEKLGLRAGVGLAAPQIDVSKRIIAVLVPNLPDKEGNPPKEAYSWQEVLYNPKIVSHSVQDAALSDGEGCLSVDRVVEGYVVRHARVTVDYYDKEGQQHRIKLKGYNAIVVQHEIDHINGVLFYDRINAKNPFE--------
General information:
TITO was launched using:
RESULT:
Template:
2OS3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79666 for 1344 contacts (-59.3/contact) +
2D Compatibility (PS) -18213 + (NN) -2654 + (LL) 512
1D Compatibility (HY) -18800 + (ID) 4950
Total energy: -123771.0 ( -92.09 by residue)
QMean score : 0.824
(partial model without unconserved sides chains):
PDB file :
Tito_2OS3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OS3-query.scw
PDB file :
Tito_Scwrl_2OS3.pdb
: