Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQEHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYG-KYQLQVFSAYKTTTKDNYIRTDFEND-QDYQQFLDETKRKSVINSDVNVTVKDKIMTLSTCEDAYSETTKRIVVVAKIIKVS |
3PSQ Chain:A ((25-205)) | -----------------------------------------------------------QFDDLLAINSDVMAWLTVKGTHIDYPIVQGENNLEYINKSVEGEYSLSGSVFLDYRNKVTFEDKYSLIYAHHMAGNVMFGELPNFRKKSFFNKHKEFSIETKTKQKLKINIFACIQTDAFDSLLFNPIDVDISSKNEFLNHIKQKSVQYREILTTNESRFVALSTCEDM--TTDGRIIVIGQI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42693 for 1413 contacts (-30.2/contact) +
2D Compatibility (PS) -18775 + (NN) -2343 + (LL) 7352
1D Compatibility (HY) -17200 + (ID) 3050
Total energy: -76709.0 ( -54.29 by residue)
QMean score : 0.528
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