Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
3L5N Chain:M ((9-84))
--------------------------------------TSNEYQNEKLANELKSLLDELNVNELATGSLNTYYKRTIKISGQKAMYALKSKDFKKMSEAKYQLQKIYNEIDEAL--
General information:
TITO was launched using:
RESULT:
Template:
3L5N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20246 for 507 contacts (-39.9/contact) +
2D Compatibility (PS) -8258 + (NN) -4032 + (LL) 2736
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -38050.0 ( -75.05 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_3L5N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L5N-query.scw
PDB file :
Tito_Scwrl_3L5N.pdb
: