Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMIKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYL-K----DFSLENVYPSWTVLFIGIAIAGLTAPVSGC-FFIGQLTVIYGFVATCIVLPIVFK-RLKAF-PLQTSIKPNTSTICAPFSLVAA-AYVIAFPKANAFIVIIFLILAQIFYFYIIIQLP-K----LLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKGLLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ |
| 3M73 Chain:A ((12-222)) | --------------------------------------------------------------------GYFGIPLGLAALSLAWFHLENLFPAARMVSDVLGIVASAVWILFILMYAYKLRYYFEEVRAEYHSPVRFSFIALIPITTMLVGDILYRWNPLIAEVLIWIGTIGQLLFSTLRVSELWQGGVFEQKSTHPSFYLPAVAANFTSASSLALLG---YHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGIVLAPAFVCVSAYLSINHGE----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291029 for 1716 contacts (-169.6/contact) +
2D Compatibility (PS) -18938 + (NN) 4709 + (LL) 10288
1D Compatibility (HY) -5200 + (ID) 850
Total energy: -301020.0 ( -175.42 by residue)
QMean score : 0.129
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