Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNHLLSMEHLSTDQIYKLIQKASQFKSGER---QLPNFEGKYVANLFFENSTRTKCSFEMAELKLGLKTISF-ETSTSSVSKGESLYDTCKTLESIGCDLLVIRHPFNNYYEKLANI-NIPIANAGDGSGQHPTQSLLDLMTIYEEYGYFEGLNVLICGDIKNSRVARSNYHSLKALGANVMFNSPNAW-----IDDSLE------APYVNIDDVIETVDIVMLLRIQHERHGLAEETRFAADDYHQKHGLNEVRYNKLQEHAIVMHPAPVNRGVEIQSDLVEASKSRIFKQMENGVYLRMAVIDELLK |
1ML4 Chain:A ((8-301)) | ---VISIRDFSKEDIETVLATAERLERELKEKGQLEYAKGKILATLFFEPSTRTRLSFESAMHRLGGAVIGFAEASTSSVKKGESLRDTIKTVEQY-CDVIVIRHPKEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGRIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQ----VNLKVLEKAKDELRIMHPLP--RVDEIHPEVDNTKHAIYFRQVFNGVPVRMALL----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ML4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -170820 for 2353 contacts (-72.6/contact) +
2D Compatibility (PS) -29796 + (NN) -7508 + (LL) 612
1D Compatibility (HY) -20000 + (ID) 5450
Total energy: -232962.0 ( -99.01 by residue)
QMean score : 0.480
|
|
|