Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILLAVTGGIAAYKAIDLTSKLTQSGYEVRVMLTNHAQKFVTPLAF-QAISRNAVYTD----TFIEENPSEIQHIALGDWADAIIVAPATANTIAKLSVGIADDLVTSTLLATE--TPKFIAPAMNVHMYENKRTQQNINILKEDGYHFIEPGSGFLACGYVAKGRMEEPLQIVSVIDAHFQNSNRLANSSFQDKRALVTAGPTIEVIDPVRFVSNRSSGKMGYAIAEALRNRGAIVTLVAGPTTLEDPKDIEVIHVQSAEEMFEQVTSRFDEQDIVVKAAAVSDYTPVDVLEHKMKKQDGDLSVSFKRTKDILKYLGEHKTSQYLIGFAAETEDIENYAQQKLRKKNADVIISNNVGDMSIGFSSDDNELTMHFKNNEKVNIKKGKKVVLAAQILDELETRWQ |
| 1MVL Chain:A ((21-199)) | --RVLLAASGSVAAIKFGNLCHCFTEWA-EVRAVVTKSSLHFLDKLSLPQEVT---LYTDEDEWSSWNKIGDPVLHIELRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIK---------NGAMAEPSLIYSTVRLFWES----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116522 for 1358 contacts (-85.8/contact) +
2D Compatibility (PS) -17439 + (NN) -4783 + (LL) 16720
1D Compatibility (HY) -14400 + (ID) 2850
Total energy: -139274.0 ( -102.56 by residue)
QMean score : 0.553
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