Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKKIPMRKCILSNEMHPKKDMIRVVVNKEGEIFADVTGKKQGRGAYVSKDVAMVEKAQQKEILEKYFKASKEQLDPVYKEIIRLIYREEIPK
1SR8 Chain:A ((107-149))
------------------------------EAEV-CETSGIFFGRGVGVKAGEKAVSRSAKLQILENFIKASRE--------------------
General information:
TITO was launched using:
RESULT:
Template:
1SR8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6120 for 176 contacts (34.8/contact) +
2D Compatibility (PS) -4622 + (NN) -1862 + (LL) 4648
1D Compatibility (HY) -1200 + (ID) 750
Total energy: 2334.0 ( 13.26 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_1SR8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SR8-query.scw
PDB file :
Tito_Scwrl_1SR8.pdb
: