Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYNGILPVYKERGLTSHDVVFKLRKILKTKKIGHTGTLDPEVAGVLPVCIGNATRVSDYVMDMGKAYEATVSIGRSTTTEDQTGDTLETKGVHSADFNKDDIDRLLENFKGVIEQIPPMYSSVKVNGKKLYEYARNNETVERPKRKVNIKDIGRISELDFKENECHFKIRVICGKGTYIRTLATDIGVKLGFPAHMSKLTRIESGGFVLKDSLTLEQIKELHEQDSLQNKLFPLEYGLKGLPSIKIKDSHIKKRILNGQKFNKN---EFDNKIKDQIVFIDDDSEKVLAIYMVHPTKESEIKPKKVFN |
2AB4 Chain:A ((1-285)) | MKHGILVAYKPKGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDLKKVFWVKMRLGLITETFDITGEVVEER---ECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVK---IFKIWDVNIEGRDVSFRVEV--SPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAA----PEEIENRIIPLEKCLEWLPRVVVHQESTKM-ILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLAL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109295 for 2144 contacts (-51.0/contact) +
2D Compatibility (PS) -28825 + (NN) -967 + (LL) 2236
1D Compatibility (HY) -20400 + (ID) 4800
Total energy: -162051.0 ( -75.58 by residue)
QMean score : 0.457
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