Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLAVVGATGLVGTKMLETLNRKNIPFDELVLFSSARSAGQEVEFQEKTYTVQELTDARASEHFDYVLMSAGGGTSEHFAPLFEKAGAIVIDNSSQWRMAEDIDLIVPEVNEPTFT--RGIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGSGMKG----KKDLAEGVN-GKAP-----EAYP-------HPIYNNVLPHIDVFLENGYTKEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVTLDKETTAEDIKALFDQDDRVVLVDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHVWCTSDNLLKGAALNAVQVLEQVMRLKGAN |
| 3PWS Chain:A ((5-339)) | ---VAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTET-AFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132081 for 2757 contacts (-47.9/contact) +
2D Compatibility (PS) -33907 + (NN) -10817 + (LL) 1176
1D Compatibility (HY) -25600 + (ID) 7200
Total energy: -208429.0 ( -75.60 by residue)
QMean score : 0.485
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