Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQWKRISLLIVFALVFGIIAFFHESRLGKWIDNEVYEFIYSSESFITTSIMLGATKVGEVWAMLCISLLLVAYLMLKRHKIEALFFALTMALSGILNPALKNIFDRERPTLLRLIDITGFSFPSGHAMGSTAYFGSGIYLLNRLNQG--------------------NSKGILIGLCAAMILLISISRVYLGVHYPTDIIAGIIGGVFCIILSTLLLRNKLIN |
1QI9 Chain:A ((392-513)) | --------------------------------------------------------------------------------------------------PNNEVTYLLPQAIQE--GSPTHPSYPSGHATQNGAFATVLKALIGLDRGGDCYPDPVYPDDDGLKLIDFRGSCLTFEGEINKLAVNVAFGRQMLGIHYRFDGIQGLLLGETITVRTLHQELMTF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56372 for 636 contacts (-88.6/contact) +
2D Compatibility (PS) -10274 + (NN) 183 + (LL) 10796
1D Compatibility (HY) 2000 + (ID) 1100
Total energy: -54767.0 ( -86.11 by residue)
QMean score : 0.200
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