Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFK------DREILQS---LNGMDKYIAKGIET----KLDIVVADEKEQGVRKFLNLGHTFGHAVE--YNHKIAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYP-------LETITDIDFETIYQYMLS---DKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
| 1NR5 Chain:A ((78-372)) | ----------------------------------------------------------------PPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSADEREGGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALDKKNDGPKKKIVLLSAIG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NR5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100186 for 2020 contacts (-49.6/contact) +
2D Compatibility (PS) -28222 + (NN) -3583 + (LL) 7020
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -154121.0 ( -76.30 by residue)
QMean score : 0.400
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